反亚油酸诱导人脐静脉内皮细胞的转录组学及生物信息学分析
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国家自然科学基金青年科学基金项目(31401487)


Transcriptomic and Bioinformatic Analyses of Human Umbilical Vein Endothelial Cells Induced by Linoelaidic Acid
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    摘要:

    通过转录组学及其生物信息学分析,研究反亚油酸诱导人脐静脉内皮细胞差异表达基因及相关信号转导通路,结果发现:126条基因发生显著变化,其中28条基因显著上调,98条基因显著下调。生物信息学分析结果表明:与细胞组成相关基因共54条,而涉及分子功能的基因共118条。本研究共富集到相关信号通路99条,其中显著变化的7条,包括萜类骨架生物合成通路、类固醇生物合成通路和肿瘤坏死通路等。根据PPI基因互作通路图,研究同时参与不同信号转导通路的靶基因,包括基质金属蛋白酶-3、FOS及肿瘤坏死受体相关因子-1等。

    Abstract:

    This article used transcriptomic analysis and bioinformatics analysis to study the differentially expressed genes at the transcriptional level after combining linoleic acid-induced human umbilical vein endothelial cells. The results showed that 126 genes were significantly changed, 28 of them were up-regulated and 98 genes were down-regulated. And the bioinformatics analysis showed that there were 54 significant differences in the gene expression of the cells, and 118 genes were significantly different from those of the gene. In addition, a total of 99 signaling pathways were detected, of which 7 pathways were significantly changed, including terpenoid skeletal biosynthetic pathways, steroid biosynthetic pathways and TNF signaling pathways. Finally, according to the PPI gene interaction pathway map, the target genes involved in different pathways were analyzed, including matrix metalloproteinase-3, FOS and TNF receptor associated factor-1.

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邱斌;刘玮;刘丽娜;宗爱珍;贾敏;徐同成;.反亚油酸诱导人脐静脉内皮细胞的转录组学及生物信息学分析[J].中国食品学报,2020,20(1):52-58

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  • 在线发布日期: 2020-02-03
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