水产品腐败希瓦氏菌CsrA蛋白序列特征及应激响应的基因表达分析
作者:
作者单位:

(1.渤海大学食品科学与工程学院 辽宁锦州 121013;2.生鲜农产品贮藏加工及安全控制技术国家地方联合工程研究中心 辽宁锦州 121013)

作者简介:

通讯作者:

中图分类号:

基金项目:

国家自然科学基金项目(32202141);辽宁省自然科学基金项目(2020-MS-288)


Protein Sequence Characteristics and Gene Expression Analysis of Stress Response of CsrA in Shewanella putrefaciens from Aquatic Products
Author:
Affiliation:

(1.College of Food Science and Engineering, Bohai University, Jinzhou 121013, Liaoning;2.Processing and Safety Control Technology for Fresh Agricultural and Aquatic Products, Jinzhou 121013, Liaoning)

Fund Project:

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    目的:探究水产品腐败希瓦氏菌中重要转录后调控蛋白CsrA的序列特征及基因表达模式。方法:克隆腐败希瓦氏菌csrA基因,采用生物信息学手段分析CsrA结构及蛋白互作网络等,利用实时荧光定量PCR技术分析csrA对冷热、高盐、饥饿、乙醇和群体感应信号分子的应激响应表达特性。结果:CsrA为高度保守的亲水蛋白,含9个磷酸化位点,含1个α-螺旋和5个β-折叠,活性结构以二聚体形式存在,预测其互作蛋白涉及参与蛋白合成、鞭毛组装与运动、生物膜形成及群体感应调控等。4 ℃培养5 h显著诱导csrA基因的表达,而45 ℃培养1 h会立即诱导csrA基因的表达;高盐浓度能显著诱导csrA基因的表达;csrA基因在营养缺失培养基中的表达均呈逐渐升高趋势,5 h时显著高于对照组;5%乙醇处理组csrA基因表达量持续上调而10%乙醇会使csrA表达水平下降;群体感应信号分子可诱导csrA基因表达上调。结论:CsrA与腐败希瓦氏菌致腐密切相关,在其应对不同环境条件时发挥重要作用,研究结果可为进一步解析CsrA的生物学功能提供参考。

    Abstract:

    Objective: The sequence characteristics and gene expression pattern of CsrA, an important post-transcriptional regulatory protein, in Shewanella putrefaciens from aquatic products were investigated in this study. Method: The csrA gene of S. putrefaciens was cloned, and the structural characteristics and interaction protein network of CsrA were analyzed by bioinformatics methods. Moreover, the expression characteristics of csrA gene in response to cold, heat, high salt, starvation, ethanol and quorum sensing signal molecules were analyzed by real-time PCR. Results: CsrA is a highly conserved hydrophilic protein with nine phosphorylation sites, consisting of two α-helixes and five β-sheet, and active structure exists as a dimer. CsrA was predicted to interact with proteins that involved in protein synthesis, flagellar assembly and movement, biofilm formation, and quorum sensing regulation. In addition, csrA gene expression was significantly induced at 4 ℃ for 5 h, while immediately induced at 45 ℃ for 1 h. High salt concentration significantly induced csrA gene expression. The expression of csrA gene increased gradually in nutrient deficiency medium, which was significantly higher than that in the control group at 5 h. The expression of csrA gene was continuously up-regulated in the 5% ethanol group, while 10% ethanol reduced the expression of csrA. Quorum-sensing signal molecules induced the up-regulated expression of csrA gene. Therefore, CsrA is closely related to the spoilage caused by S. putrefaciens and plays an important role in its response to different environmental conditions, which can provide reference for further analysis of the biological function of CsrA.

    参考文献
    相似文献
    引证文献
引用本文

李秋莹,周文萱,崔方超,檀茜倩,孙彤,励建荣.水产品腐败希瓦氏菌CsrA蛋白序列特征及应激响应的基因表达分析[J].中国食品学报,2023,23(8):50-59

复制
分享
文章指标
  • 点击次数:
  • 下载次数:
  • HTML阅读次数:
  • 引用次数:
历史
  • 收稿日期:2022-08-07
  • 最后修改日期:
  • 录用日期:
  • 在线发布日期: 2023-09-01
  • 出版日期:
版权所有 :《中国食品学报》杂志社     京ICP备09084417号-4
地址 :北京市海淀区阜成路北三街8号9层      邮政编码 :100048
电话 :010-65223596 65265375      电子邮箱 :chinaspxb@vip.163.com
技术支持:北京勤云科技发展有限公司

漂浮通知