酸性磷酸酶的生物信息学分析及抑制剂筛选
CSTR:
作者:
作者单位:

(渤海大学食品科学与工程学院 生鲜农产品贮藏加工及安全控制技术国家地方联合工程研究中心 辽宁锦州 121013)

作者简介:

通讯作者:

中图分类号:

基金项目:

国家自然科学基金联合基金项目(U20A2067)


Bioinformatics Analysis and Inhibitor Screening of Acid Phosphatase in Rainbow Trout
Author:
Affiliation:

(College of Food Science and Technology, Bohai University, National and Local Joint Engineering Research Center of Storage, Processing and Safety Control Technology of Fresh Agricultural Products, Jinzhou 121013, Liaoning)

Fund Project:

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    肌苷酸(IMP)是核苷酸降解过程中的重要物质,也是水产品鲜味的呈味物质之一,在酸性磷酸酶的作用下降解为次黄嘌呤核糖核苷(HxR)和次黄嘌呤(Hx),因此研究酸性磷酸酶的酶学特性和抑制其活性具有重要意义。基于生物信息学分析酸性磷酸酶的酶学特性,并采用虚拟筛选技术筛选酶的抑制剂。结果表明:酸性磷酸酶ACPI和ACPII分别含有488个和348个氨基酸,均为稳定的亲水蛋白。ACPI含有37个磷酸化位点和5个N-糖基化位点,而ACPII含有14个磷酸化位点和1个N-糖基化位点,两者均不含O-糖基化位点。ACPI存在一个跨膜结构域,不存在信号肽,亚细胞定位于质膜中,而ACPII不含跨膜结构域,含有1个信号肽,亚细胞定位于胞外基质中。ACPI和ACPII的二级结构中,无规卷曲和延伸链的含量较高。ACPI和ACPII的最适温度均为40 ℃,最适pH值均为5.0,米氏常数Km分别为0.23 mmol/L和0.14 mmol/L,最大反应速率vmax分别为1.04 μmol/(L·min) p-NP和1.06 μmol/(L·min) p-NP。筛选出表儿茶素没食子酸酯(ECG)、表儿茶素、表没食子儿茶素没食子酸酯、没食子酸和水杨酸5种抑制剂,ECG对ACPI和ACPII的抑制作用最强,IC50值分别为0.24 mmol/L和0.27 mmol/L。本研究为通过靶向控制ACP活性来改善水产品风味提供理论依据。

    Abstract:

    Inosine monophosphate (IMP) is an important substance in the process of nucleotide degradation, and is also one of the flavor substances of aquatic products. IMP is degraded to hypoxanthine riboside (HxR) and hypoxanthine (Hx) under the action of acid phosphatase. Therefore, it is of great significance to study the enzymatic characteristics of acid phosphatase and inhibit its activity. The enzymatic properties of acid phosphatases were analyzed based on bioinformatics and enzyme inhibitors were screened by virtual screening techniques. The results showed that ACPI and ACPII contained 488 and 348 amino acids, respectively, and both ACPI and ACPII were stable hydrophilic proteins. ACPI contained 37 phosphorylation sites and 5 N-glycosylation sites, whereas ACPII contains 14 phosphorylation sites and 1 N-glycosylation site, and neither of them contained an O-glycosylation site. ACPI existed in a transmembrane structural domain and had no signal peptide, and was subcellularly localized in the plasma membrane, while ACPII contained no transmembrane domain, a signal peptide, and was subcellularly localized in the extracellular matrix. ACPI and ACPII had the highest amount of randomly coiled and extended chains in their secondary structures. The optimal temperature and pH of ACPI and ACPII were both 40 ℃ and 5.0, respectively. Km was 0.23 mmol/L and 0.14 mmol/L, and vmax was 1.04 μmol/(L·min) p-NP and 1.06 μmol/(L·min) p-NP, respectively. Five inhibitors, epigallocatechin gallate (ECG), epicatechin, epigallocatechin gallate, gallic acid and salicylic acid were virtually screened by molecular docking. ECG had the strongest inhibitory effect on ACPI and ACPII, with IC50 of 0.24 mmol/L and 0.27 mmol/L, respectively.

    参考文献
    相似文献
    引证文献
引用本文

郑婕,陈刘胤,楚晓燕,李颖畅,李学鹏.酸性磷酸酶的生物信息学分析及抑制剂筛选[J].中国食品学报,2025,25(5):195-205

复制
分享
相关视频

文章指标
  • 点击次数:
  • 下载次数:
  • HTML阅读次数:
  • 引用次数:
历史
  • 收稿日期:2024-05-03
  • 最后修改日期:
  • 录用日期:
  • 在线发布日期: 2025-06-24
  • 出版日期:
文章二维码
版权所有 :《中国食品学报》杂志社     京ICP备09084417号-4
地址 :北京市海淀区阜成路北三街8号9层      邮政编码 :100048
电话 :010-65223596 65265375      电子邮箱 :chinaspxb@vip.163.com
技术支持:北京勤云科技发展有限公司

漂浮通知


×
喜报 | 《中国食品学报》入选2025年度首都科技期刊卓越行动计划中英文单刊